{"id":173,"date":"2023-01-31T09:35:01","date_gmt":"2023-01-31T14:35:01","guid":{"rendered":"https:\/\/www.yorku.ca\/science\/research\/pjohnsondev\/?page_id=173"},"modified":"2023-02-07T10:31:20","modified_gmt":"2023-02-07T15:31:20","slug":"useful-links","status":"publish","type":"page","link":"https:\/\/www.yorku.ca\/science\/research\/pjohnson\/useful-links\/","title":{"rendered":"Useful Links"},"content":{"rendered":"\n<div style=\"height:24px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-1 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<h2 class=\"wp-block-heading\">Journals<\/h2>\n\n\n\n<ul class=\"wp-block-list\"><li>Accounts of Chemical Research<\/li><li>Annual Review of Biochemistry<\/li><li>Annual Review of Biophysics and Biomolecular Structure<\/li><li><a href=\"http:\/\/pubs.acs.org\/journals\/bichaw\/index.html\" target=\"_blank\" rel=\"noreferrer noopener\">Biochemistry<\/a><\/li><li>Biopolymers<\/li><li><a href=\"http:\/\/www.cell.com\/\" target=\"_blank\" rel=\"noreferrer noopener\">Cell<\/a><\/li><li>Chemical Reviews<\/li><li>Chemistry and Biology<\/li><li>Concepts in Magnetic Resonance<\/li><li>Current Biology<\/li><li>Current Opinion in Structural Biology<\/li><li>EMBO Journal<\/li><li><a href=\"http:\/\/pubs.acs.org\/journals\/jacsat\/index.html\" target=\"_blank\" rel=\"noreferrer noopener\">JACS<\/a><\/li><li><a href=\"http:\/\/www.jbc.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">Journal of Biological Chemistry<\/a><\/li><li>Journal of Biomolecular NMR<\/li><li>Journal of Magentic Resonance<\/li><li>The Journal of Virology<\/li><li>Methods<\/li><li><a href=\"http:\/\/www.molecule.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">Molecular Cell<\/a><\/li><li>Nature<\/li><li>Nature Structural Biology<\/li><li>Nucleic Acids Research<\/li><li><a href=\"http:\/\/www.pnas.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">PNAS<\/a><\/li><li>Progress in NMR Spectroscopy<\/li><li><a href=\"http:\/\/www.proteinscience.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">Protein Science<\/a><\/li><li><a href=\"http:\/\/www.rnajournal.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">RNA<\/a><\/li><li><a href=\"http:\/\/www.sciencemag.org\/\" target=\"_blank\" rel=\"noreferrer noopener\">Science<\/a><\/li><li>Structure<\/li><li>Trends in Biochemical Sciences<\/li><li>Virology<\/li><\/ul>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<h2 class=\"wp-block-heading\">Biochemical Analysis<\/h2>\n\n\n\n<ul class=\"wp-block-list\"><li>BLAST<\/li><li><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/Entrez\/\" target=\"_blank\" rel=\"noreferrer noopener\">Entrez<\/a><\/li><li><a href=\"http:\/\/us.expasy.org\/tools\/\" target=\"_blank\" rel=\"noreferrer noopener\">ExPASy<\/a><\/li><li>mfold program<\/li><li>Non-canonical basepair database<\/li><li>Oligonucleotide MW and Extinction Coefficient Calculators\u00a0<a href=\"http:\/\/www.ambion.com\/techlib\/misc\/oligo_calculator.html\" target=\"_blank\" rel=\"noreferrer noopener\">first<\/a>\u00a0<a href=\"http:\/\/www.dharmacon.com\/rna\/rna.aspx\" target=\"_blank\" rel=\"noreferrer noopener\">second<\/a><\/li><li>Protein Data Bank<\/li><li>protein pI, MW<\/li><li>PredictProtein<\/li><li>SCOR<\/li><\/ul>\n\n\n\n<p><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Programs<\/h2>\n\n\n\n<ul class=\"wp-block-list\"><li>Autodock<\/li><li><a href=\"http:\/\/www.cgl.ucsf.edu\/chimera\/\" target=\"_blank\" rel=\"noreferrer noopener\">Chimera<\/a><\/li><li>CNS<\/li><li>McSym<\/li><li>NMRPipe<\/li><li>NMRView<\/li><li>MOLMOL<\/li><li><a href=\"http:\/\/spin.niddk.nih.gov\/bax\/\" target=\"_blank\" rel=\"noreferrer noopener\">PALES and SSIA<\/a><\/li><li><a href=\"http:\/\/pymol.sourceforge.net\/\" target=\"_blank\" rel=\"noreferrer noopener\">PyMol<\/a><\/li><li><a href=\"http:\/\/nmr.cit.nih.gov\/xplor-nih\/\" target=\"_blank\" rel=\"noreferrer noopener\">XPLOR-NIH<\/a><\/li><\/ul>\n\n\n\n<p><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Other labs<\/h2>\n\n\n\n<ul class=\"wp-block-list\"><li>Donaldson Laboratory<\/li><li>Marino Laboratory<\/li><li><a href=\"http:\/\/otter.biochem.ubc.ca\/\" target=\"_blank\" rel=\"noreferrer noopener\">McIntosh Laboratory<\/a><\/li><li><a href=\"http:\/\/www.hhmi.umbc.edu\/\" target=\"_blank\" rel=\"noreferrer noopener\">Summers Laboratory<\/a><\/li><\/ul>\n\n\n\n<p><\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>Journals Accounts of Chemical Research Annual Review of Biochemistry Annual Review of Biophysics and Biomolecular Structure Biochemistry Biopolymers Cell Chemical Reviews Chemistry and Biology Concepts in Magnetic Resonance Current Biology Current Opinion in Structural Biology EMBO Journal JACS Journal of Biological Chemistry Journal of Biomolecular NMR Journal of Magentic Resonance The Journal of Virology Methods [&hellip;]<\/p>\n","protected":false},"author":45,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_kad_blocks_custom_css":"","_kad_blocks_head_custom_js":"","_kad_blocks_body_custom_js":"","_kad_blocks_footer_custom_js":"","footnotes":""},"tags":[],"class_list":["post-173","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.0 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Useful Links - The Johnson Lab<\/title>\n<meta name=\"robots\" content=\"noindex, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Useful Links - The Johnson 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